Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889916.1_cds_XP_016444604.1_39646
CDS Infomation

[gene=LOC107769865] [db_xref=GeneID:107769865] [protein=scarecrow-like protein 21] [protein_id=XP_016444604.1] [location=3575..4972] [gbkey=CDS]
Sequence

ATGGGAGATATTGTTGATCAAGAAGAAGAGTTGTTGTGCCTTAGACTTGCTATAGTAACA
AATTCATGTTGTGAGAGGAAAAAGATCAAGAAGAGAAAGAGGAAGGAATTAGCTTTCATC
AACACTTGGGATTTAAATGAAAGTAATTATTGTGAAGGAAAAATATTTAGGCTTTTGGAG
TTAAGAGAATCCATGCTAAAAATAGATGTAAAGAAAAAAGCTAGTGTGGTTGAAGATGGA
AAAGGCCTTCATCTAATCCATTCATTGCTTATTTCTGCCACAGCAGTTGATGAAAATAGC
TTTGATTCAGCTGTAGAAAATCTTCATGAATTATACCAAAATGTTTCCTTACTTGGAGAT
TCTGTCCAAAGGGTTGCTGCCTATTTTGCTGATGGATTAATAGCGAGGTTATTAACGCGA
AATTCGCCTTTTTATGACATGATAATGAAGCTTCCTACACAAGAAGAAGAGTTCTTGGCT
TTCACTGAATTCTACAAGGTCTCTCCTTTTTATCAATTTGCTCATTTCACATCTAACCAA
GCCATTCTTGAAGCATTTGAAAAAGAAGAAAAAACCAACAATGGACTCTTGCATGTTATT
GACTTTGACATATCCTATGGATTTCAATGGCCTTCTCTTATTCAATCTCTCTCTGAAAAT
GCAGCCACACCTAATAGAATCTCTCTCAAGATCACTAGCTACGGAAAAACAATCGATGAA
TTGAGAGAAACCGAGACAAGGCTTGTCAGTTTTGCAAAGGGTTTTCGAAATTTATCTTTT
GAGTTTCAAGGGGTTTTAAGTGGATCTAAACTTAGTAACCTAATAAAAAGGAAGAATGAA
ACATTAGCTATAAATTTGATCTTTCATTTGAACTCATTAAGCAGTTATTCCAAGGTTTCC
CACACGTTGAAAGAAGTCCATAATCTTTGCCCTTCAATTGTCACCATAGTGGAACAAGAA
GGATGCAAAAGCCCTCAAAATTTCTTGCCAAGATTCATGGAGTCATTGCATTATTTTGCA
GCCATGTTTGACTCATTGGATGATTGCTTACCAATTGATAGTATTGAAAGATTGAGCATT
GAAAAAAACCTTCTTGGAAAAGAGATCAAGAATGTGTTGAACTATGAAAAAAATAACAAT
TTCTTATCAAGATATGAGCAAATGGAGACATGGAAAGGAAGAATGGAAAGCCATGGATTT
TTAGGACTTCCATTAAGTTCTAAGAATATAATGCAAGCAAAGTTACTTTTGAAAATCAGA
AGTCATTCTTCCCCAATACAACTTGATGGAGGAAATGGAGGGTTTATGATATTTGAAACG
GAAGATCCAAGAGCTATTTCTCTAGCATGGCAAGATTGGTCTATTGTAACTGCATCTGCA
TGGCATTGTGTACTGTAG

Peptide Sequence

PEP ID

XP_016444604.1
PEP Infomation

PREDICTED: scarecrow-like protein 21 [Nicotiana tabacum]
Sequence

MGDIVDQEEELLCLRLAIVTNSCCERKKIKKRKRKELAFINTWDLNESNYCEGKIFRLLE
LRESMLKIDVKKKASVVEDGKGLHLIHSLLISATAVDENSFDSAVENLHELYQNVSLLGD
SVQRVAAYFADGLIARLLTRNSPFYDMIMKLPTQEEEFLAFTEFYKVSPFYQFAHFTSNQ
AILEAFEKEEKTNNGLLHVIDFDISYGFQWPSLIQSLSENAATPNRISLKITSYGKTIDE
LRETETRLVSFAKGFRNLSFEFQGVLSGSKLSNLIKRKNETLAINLIFHLNSLSSYSKVS
HTLKEVHNLCPSIVTIVEQEGCKSPQNFLPRFMESLHYFAAMFDSLDDCLPIDSIERLSI
EKNLLGKEIKNVLNYEKNNNFLSRYEQMETWKGRMESHGFLGLPLSSKNIMQAKLLLKIR
SHSSPIQLDGGNGGFMIFETEDPRAISLAWQDWSIVTASAWHCVL

Transcript Sequence

Gene sequence data has not been registered.